CDS

Accession Number TCMCG066C29244
gbkey CDS
Protein Id XP_034605364.1
Location join(33193863..33194147,33195034..33195252,33195715..33195775,33197104..33197180,33197262..33197519,33198177..33198266,33198744..33198878,33199476..33199625,33199920..33200023,33200706..33200759,33200854..33200944,33201123..33201200,33201299..33201440,33201641..33201714)
Gene LOC117865308
GeneID 117865308
Organism Setaria viridis

Protein

Length 605aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034749473.1
Definition tyrosyl-DNA phosphodiesterase 1 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category L
Description Tyrosyl-DNA phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10862        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000012        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0017005        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070259        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTTCAGGAAGGACCGAACCCTATAGTTGTGCAATCCAAGGGGCAGAGGAGGAAGGTTTGCGCTCTGGAGAAAGCCAGGATTGCACATGATGATGTCCTCGAACTGATTCCTGGTGATTATTTCATGAAGTATGTGAATCTTGGTGATGAACATAAAAGTTCAGTACCAATGGACTTGGGTAGCATAAAGAAGGAAAGGAGGCATAGCGAGGAAGATAGTGCAGCAGTCAAGAGGAATCGACAGATCATGGAAGATGAGGCTCTGGCAAGAACACTGCAGGAAAGCTTCACAGAAGAGAATACAACTGTTTCCGGCATGACTTCTGGCCAAAAAATAAGTCCACCTGATAGTGCTGGTTCTTCTGGAAAACATAATGAAAGAATGCACTCTGTTGATCCTTTGAAAGATATGCTCTCATTAACTTTCCGGCTCATGCGGGTCCAAGGTCTTCCATCATGGACTAACACTTCTTCAGTTACCATTCAGGATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTACATGGTGGACATGGATTGGTTGCTTTCTGCATGTCCAAGTTTGAGAAAAGTTCCACATGTCCTAGTCCTACATGGACAAGATGGTGCTTCAGTAGAGCTTATGAAGAAACTGAAGCCTGCAAATTGGATCCTTCACAAACCTCCACTCCCAATTTCATTTGGAACACATCATTCTAAGGCCATGTTGCTTGTATATCCTCAAGGAATCCGTATTGTTGTGCACACAGCAAATTTGATACATGTTGACTGGAATTACAAAAGCCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGACACAAAGGATCTGAATAAAAAAGCTCCATTTGAGAATGATCTAGTTGATTATCTTAGTGCACTTAAGTGGCCTGAGTTCAGAGTAAATCTCCCAGAGGTTGGTGATGTCAACATCAATGCAGCATTCTTTAGGAAATTTGACTATAGTAATTCAATGGTCAGGTTGATTGGATCAGTTCCTGGTTATCACGTGGGCCCCAATATTAGAAAGTGGGGCCATATGAAGCTTCGGAATGTTCTTGAGGAATGCATGTTTGATAAACAATTTTGCAAGTCCCCTCTAATTTATCAGTTTTCTTCCTTGGGGTCACTTGATGAGAAATGGATGAGTGAATTTGCATACTCGCTGTCAGCTGGTAAATCAGATGATGGATCACAGCTAGGTATCGGGAAGCCACTGATTGTCTGGCCTACAGTGGAAGATGTCCGTTGCTCAATAGAGGGTTATGCAGCTGGTAGTTGCATTCCAAGTCCTCAAAAGAATGTTGAGAAAGACTTCTTGAAGAAATATTGGTCCAGGTGGAAAGCGGACCATGTAGGTCGTTGTCGGGCAATGCCTCACATAAAAACGTTTACTCGTTACAGTGGTCAAAACATTGCATGGTTTCTGCTTACGTCATCAAATTTAAGCAAAGCTGCTTGGGGTGCGCTGCAAAAGAACAACACACAGCTGATGATACGCTCATATGAGCTAGGTGTATTATTCTTGCCCCAAACACTCCAATCTGTACCTCAATTCTCGTGCACGGAGAGGAACGCTTCAAACCGGGATGGCCTCGCCCTTGGCAAGACAATCAAGACCAAGCTGGTCACGCTCTGCTGGAAAGGCGACGAAGAAAAGGAACCGTCTACGAAGACCGTCAGATTGCCTGTGCCGTATCAACTCCCTCCACAACCTTACGGCACAGAAGACGTCCCTTGGTCATGGGATCGGAGGTACACAAAGAAGGATGTGTATGGTTCAGTCTGGCCGCGTCATGGGTAG
Protein:  
MDFQEGPNPIVVQSKGQRRKVCALEKARIAHDDVLELIPGDYFMKYVNLGDEHKSSVPMDLGSIKKERRHSEEDSAAVKRNRQIMEDEALARTLQESFTEENTTVSGMTSGQKISPPDSAGSSGKHNERMHSVDPLKDMLSLTFRLMRVQGLPSWTNTSSVTIQDVIQGEVLLAVLSNYMVDMDWLLSACPSLRKVPHVLVLHGQDGASVELMKKLKPANWILHKPPLPISFGTHHSKAMLLVYPQGIRIVVHTANLIHVDWNYKSQGLWMQDFPWKDTKDLNKKAPFENDLVDYLSALKWPEFRVNLPEVGDVNINAAFFRKFDYSNSMVRLIGSVPGYHVGPNIRKWGHMKLRNVLEECMFDKQFCKSPLIYQFSSLGSLDEKWMSEFAYSLSAGKSDDGSQLGIGKPLIVWPTVEDVRCSIEGYAAGSCIPSPQKNVEKDFLKKYWSRWKADHVGRCRAMPHIKTFTRYSGQNIAWFLLTSSNLSKAAWGALQKNNTQLMIRSYELGVLFLPQTLQSVPQFSCTERNASNRDGLALGKTIKTKLVTLCWKGDEEKEPSTKTVRLPVPYQLPPQPYGTEDVPWSWDRRYTKKDVYGSVWPRHG